Implemented Suffix Tree Data Structure (#11554)
* Implemented KD-Tree Data Structure
* Implemented KD-Tree Data Structure. updated DIRECTORY.md.
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* E501 for build_kdtree.py, hypercube_points.py, nearest_neighbour_search.py
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* Update data_structures/kd_tree/build_kdtree.py
Co-authored-by: Christian Clauss <cclauss@me.com>
* Update data_structures/kd_tree/example/hypercube_points.py
Co-authored-by: Christian Clauss <cclauss@me.com>
* Update data_structures/kd_tree/example/hypercube_points.py
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* Implementation of the suffix tree data structure
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* Implemented Suffix Tree Data Structure.
Added some comments to my files in #11532, #11554.
* updating DIRECTORY.md
* Implemented Suffix Tree Data Structure.
Added some comments to my files in #11532, #11554.
---------
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Christian Clauss <cclauss@me.com>
Co-authored-by: Ramy-Badr-Ahmed <Ramy-Badr-Ahmed@users.noreply.github.com>
2024-09-28 13:37:00 +00:00
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# Created by: Ramy-Badr-Ahmed (https://github.com/Ramy-Badr-Ahmed)
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# in Pull Request: #11532
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# https://github.com/TheAlgorithms/Python/pull/11532
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#
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# Please mention me (@Ramy-Badr-Ahmed) in any issue or pull request
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# addressing bugs/corrections to this file.
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# Thank you!
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kd tree data structure implementation (#11532)
* Implemented KD-Tree Data Structure
* Implemented KD-Tree Data Structure. updated DIRECTORY.md.
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* Create __init__.py
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* Replaced legacy `np.random.rand` call with `np.random.Generator` in kd_tree/example_usage.py
* Replaced legacy `np.random.rand` call with `np.random.Generator` in kd_tree/hypercube_points.py
* added typehints and docstrings
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* docstring for search()
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* Added tests. Updated docstrings/typehints
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* updated tests and used | for type annotations
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* E501 for build_kdtree.py, hypercube_points.py, nearest_neighbour_search.py
* I001 for example_usage.py and test_kdtree.py
* I001 for example_usage.py and test_kdtree.py
* Update data_structures/kd_tree/build_kdtree.py
Co-authored-by: Christian Clauss <cclauss@me.com>
* Update data_structures/kd_tree/example/hypercube_points.py
Co-authored-by: Christian Clauss <cclauss@me.com>
* Update data_structures/kd_tree/example/hypercube_points.py
Co-authored-by: Christian Clauss <cclauss@me.com>
* Added new test cases requested in Review. Refactored the test_build_kdtree() to include various checks.
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* Considered ruff errors
* Considered ruff errors
* Apply suggestions from code review
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
* Update kd_node.py
* imported annotations from __future__
* [pre-commit.ci] auto fixes from pre-commit.com hooks
for more information, see https://pre-commit.ci
---------
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Christian Clauss <cclauss@me.com>
2024-09-03 12:39:09 +00:00
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import numpy as np
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from data_structures.kd_tree.build_kdtree import build_kdtree
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from data_structures.kd_tree.example.hypercube_points import hypercube_points
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from data_structures.kd_tree.nearest_neighbour_search import nearest_neighbour_search
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def main() -> None:
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"""
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Demonstrates the use of KD-Tree by building it from random points
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in a 10-dimensional hypercube and performing a nearest neighbor search.
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"""
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num_points: int = 5000
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cube_size: float = 10.0 # Size of the hypercube (edge length)
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num_dimensions: int = 10
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# Generate random points within the hypercube
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points: np.ndarray = hypercube_points(num_points, cube_size, num_dimensions)
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hypercube_kdtree = build_kdtree(points.tolist())
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# Generate a random query point within the same space
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rng = np.random.default_rng()
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query_point: list[float] = rng.random(num_dimensions).tolist()
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# Perform nearest neighbor search
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nearest_point, nearest_dist, nodes_visited = nearest_neighbour_search(
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hypercube_kdtree, query_point
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)
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# Print the results
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print(f"Query point: {query_point}")
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print(f"Nearest point: {nearest_point}")
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print(f"Distance: {nearest_dist:.4f}")
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print(f"Nodes visited: {nodes_visited}")
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if __name__ == "__main__":
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main()
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